Nine years have passed. During that time, Shiro, Yuri, Rick and the others gained experience and grew up. Meanwhile, in Section 13, Elixir experiments continued. Although Amaimon successfully possesses a new body, Lucifer is still unable to find a suitable body, and in his suffering, his attachment to material things grows stronger. However, in the midst of this all, a being that is "the universe itself" incarnates in a certain test subject.